Ginkgo Bioworks

Ginkgo Bioworks

Computational Synthetic Chemist

Boston, Massachusetts · Senior

Sponsorship not specified$115k-$165kDetected 59 days ago
PythonMachine LearningPandasA/B TestingResearchCollaborationMentoring

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odds of building a lasting career here

54Sponsors, lottery-bound
Cap-exempt (no lottery)0
Sponsors this role80
Entry-level history0
PERM / green-card track0
Lottery odds (Level III)83
Fits your clock70

Sponsors, but it's cap-subject — you still face the weighted lottery (~45% per draw at Level III). Good if you win; have a cap-exempt backup on your list.

Lottery odds assume a STEM candidate.

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Files H-1B transfers

1 transfer filing in the last year, covering 1 worker. Median labor-condition decision: 7 days. An employer that already files transfers is one that can take over an existing H-1B.

Sourced from Department of Labor LCA, PERM and prevailing-wage disclosure data. Employer matching is by name, so figures may be split across an employer's legal entities. Absence of a filing means none appears in our copy of the data, not that none exists.

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About the role

  • Computational route planning, retrosynthesis, condition prediction, and automated or high-throughput experimentation resources will be standard working tools-not occasional aids.
  • You will consume model output, judge when it is useful, correct it when it is not, and feed outcomes back into the planning and prediction workflows.
  • The ideal candidate is an accomplished bench chemist who is also fluent in computer-aided synthesis planning (CASP), reaction-prediction tools, and reaction data.

Responsibilities

  • Design, select, and execute practical multi-step routes to novel drug-like singleton compounds and focused sets under real constraints on time, materials, building blocks, and available resources.
  • Apply a broad synthetic-organic chemistry toolkit and own purification and characterization through delivery of high-quality, well-characterized compounds on schedule.
  • Use chemical structure and reaction representations and building-block catalogs to constrain plans to realistic starting materials, and design or interpret HTE and other reaction-optimization experiments.
  • Design chemistry for automation and parallel execution where useful, while recognizing when a route genuinely requires manual bench work.
  • Collaborate with chemists, computational scientists, and software engineers to define useful tools, make go/no-go heuristics explicit, and mentor junior chemists.

Requirements

  • or an M.S. with 6 years, or a B.S. with 9 years, of relevant experience.
  • You know the difference between useful guidance and an output that is not reliable enough to use.
  • You are intellectually curious and impatient with the status quo, with a passion for establishing and advancing state-of-the-art chemistry workflows in practical production settings.

Nice to have

  • Python scripting with tools such as RDKit, pandas, or Jupyter for manipulating compound sets, parsing analytical output, or prototyping analyses.
  • Experience running chemistry on robotic platforms, liquid handlers, flow systems, or other automated resources.
  • Industrial HTE or nanoscale reaction-screening experience.
  • Prior work in a CRO, fee-for-service, or similarly schedule-driven environment.
  • Experience with ELN/LIMS configuration or reaction-data model definition.
  • Experience scaling a validated route from milligram to multi-gram quantities.
  • Experience with inline or process monitoring such as ReactIR, benchtop NMR, or online LC-MS.
  • Experience mentoring or supervising junior chemists.

Skills

  • Feed practical outcomes and corrected synthetic judgment back into planning, prediction, and cheminformatics workflows.

Compensation

  • Receive competitive compensation, generous equity in a public company, and a robust benefits package.

Benefits

  • critically evaluate proposed routes and predictions and explain when they are implausible, impractical, or outside reliable coverage.

Company info

  • Our mission is to make biology easier to engineer.
  • We are hiring a Senior Engineer I, Synthetic Chemistry to design and execute multi-step syntheses of novel drug-like molecules, including singleton analogs and small focused sets that cannot be made in plate format.

This listing is sourced directly from Ginkgo Bioworks's careers page and normalized into a canonical job model.